Index

A

addObserver() (slicer.util.VTKObservationMixin method) addParameterEditWidgetConnections() (in module slicer.util) addVolumeFromArray() (in module slicer.util) addVolumeFromITKImage() (in module slicer.util) app (in module slicer) array() (in module slicer.util) arrayFromGridTransform() (in module slicer.util) arrayFromGridTransformModified() (in module slicer.util) arrayFromMarkupsControlPointData() (in module slicer.util) arrayFromMarkupsControlPointDataModified() (in module slicer.util) arrayFromMarkupsControlPoints() (in module slicer.util) arrayFromMarkupsCurveData() (in module slicer.util) arrayFromMarkupsCurvePoints() (in module slicer.util) arrayFromModelCellData() (in module slicer.util) arrayFromModelCellDataModified() (in module slicer.util)

arrayFromModelPointData() (in module slicer.util) arrayFromModelPointDataModified() (in module slicer.util) arrayFromModelPoints() (in module slicer.util) arrayFromModelPointsModified() (in module slicer.util) arrayFromModelPolyIds() (in module slicer.util) arrayFromSegment() (in module slicer.util) arrayFromSegmentBinaryLabelmap() (in module slicer.util) arrayFromSegmentInternalBinaryLabelmap() (in module slicer.util) arrayFromTableColumn() (in module slicer.util) arrayFromTableColumnModified() (in module slicer.util) arrayFromTransformMatrix() (in module slicer.util) arrayFromVolume() (in module slicer.util) arrayFromVolumeModified() (in module slicer.util) arrayFromVTKMatrix() (in module slicer.util) as_file() (slicer.packaging.FileIdentifier method)

C

caller (slicer.packaging.FileIdentifier attribute) (slicer.packaging.Requirements attribute) cancel() (in module slicer.cli) chdir (class in slicer.util) childWidgetVariables() (in module slicer.util) cleanup() (slicer.ScriptedLoadableModule.ScriptedLoadableModuleWidget method) clickAndDrag() (in module slicer.util)

computeChecksum() (in module slicer.util) confirmOkCancelDisplay() (in module slicer.util) confirmRetryCloseDisplay() (in module slicer.util) confirmYesNoDisplay() (in module slicer.util) constraints (slicer.packaging.Requirements attribute) createNode() (in module slicer.cli) createParameterNode() (slicer.ScriptedLoadableModule.ScriptedLoadableModuleLogic method) createProgressDialog() (in module slicer.util)

D

DATA_STORE_URL (in module slicer.util) dataframeFromMarkups() (in module slicer.util) dataframeFromTable() (in module slicer.util) delayDisplay() (in module slicer.util) (slicer.ScriptedLoadableModule.ScriptedLoadableModuleTest method)

displayPythonShell() (in module slicer.util) downloadAndExtractArchive() (in module slicer.util) downloadFile() (in module slicer.util)

E

errorDisplay() (in module slicer.util) exit() (in module slicer.util) exitFailure() (in module slicer.testing) exitSuccess() (in module slicer.testing)

exportNode() (in module slicer.util) extra_args (slicer.packaging.Requirements attribute) extractAlgoAndDigest() (in module slicer.util) extractArchive() (in module slicer.util)

F

FileIdentifier (class in slicer.packaging) findChild() (in module slicer.util)

findChildren() (in module slicer.util) finder (slicer.packaging.Requirements attribute) forceRenderAllViews() (in module slicer.util)

G

getAllParameterNodes() (slicer.ScriptedLoadableModule.ScriptedLoadableModuleLogic method) getDefaultModuleDocumentationLink() (slicer.ScriptedLoadableModule.ScriptedLoadableModule method) getFilesInDirectory() (in module slicer.util) getFirstNodeByClassByName() (in module slicer.util) getFirstNodeByName() (in module slicer.util) getModule() (in module slicer.util) getModuleGui() (in module slicer.util) getModuleLogic() (in module slicer.util)

getModuleWidget() (in module slicer.util) getNewModuleGui() (in module slicer.util) getNewModuleWidget() (in module slicer.util) getNode() (in module slicer.util) getNodes() (in module slicer.util) getNodesByClass() (in module slicer.util) getObserver() (slicer.util.VTKObservationMixin method) getParameterNode() (slicer.ScriptedLoadableModule.ScriptedLoadableModuleLogic method) getSubjectHierarchyItemChildren() (in module slicer.util)

H

hasObserver() (slicer.util.VTKObservationMixin method)

I

identifier (slicer.packaging.FileIdentifier attribute) importClassesFromDirectory() (in module slicer.util) importModuleObjects() (in module slicer.util) importQtClassesFromDirectory() (in module slicer.util) importVTKClassesFromDirectory() (in module slicer.util)

infoDisplay() (in module slicer.util) InstallationAbortedError interactive (slicer.packaging.Requirements attribute) itkImageFromVolume() (in module slicer.util) itkImageFromVolumeModified() (in module slicer.util)

L

launchConsoleProcess() (in module slicer.util) LazyProxyModule (class in slicer.packaging) loadAnnotationFiducial() (in module slicer.util) loadAnnotationROI() (in module slicer.util) loadAnnotationRuler() (in module slicer.util) loadColorTable() (in module slicer.util) loadFiberBundle() (in module slicer.util) loadLabelVolume() (in module slicer.util) loadMarkups() (in module slicer.util) loadMarkupsClosedCurve() (in module slicer.util) loadMarkupsCurve() (in module slicer.util) loadMarkupsFiducialList() (in module slicer.util) loadModel() (in module slicer.util) loadNodeFromFile() (in module slicer.util)

loadNodesFromFile() (in module slicer.util) loadScalarOverlay() (in module slicer.util) loadScene() (in module slicer.util) loadSegmentation() (in module slicer.util) loadSequence() (in module slicer.util) loadShaderProperty() (in module slicer.util) loadTable() (in module slicer.util) loadText() (in module slicer.util) loadTransform() (in module slicer.util) loadUI() (in module slicer.util) loadVolume() (in module slicer.util) logProcessOutput() (in module slicer.util) longPath() (in module slicer.util) lookupTopLevelWidget() (in module slicer.util)

M

mainWindow() (in module slicer.util) messageBox() (in module slicer.util) MessageDialog (class in slicer.util) module slicer slicer.cli slicer.packaging slicer.ScriptedLoadableModule slicer.testing slicer.util

moduleNames (in module slicer) moduleNames() (in module slicer.util) modulePath() (in module slicer.util) modules (in module slicer) (slicer.packaging.Requirements attribute) moduleSelector() (in module slicer.util) MRMLNodeNotFoundException mrmlScene (in module slicer)

N

name (slicer.packaging.FileIdentifier attribute) (slicer.packaging.Requirements attribute)

need_install (slicer.packaging.Requirements attribute) NodeModify (class in slicer.util)

O

Observations (slicer.util.VTKObservationMixin property) observer() (slicer.util.VTKObservationMixin method) onEditSource() (slicer.ScriptedLoadableModule.ScriptedLoadableModuleWidget method) onReload() (slicer.ScriptedLoadableModule.ScriptedLoadableModuleWidget method) onReloadAndTest() (slicer.ScriptedLoadableModule.ScriptedLoadableModuleWidget method) onTest() (slicer.ScriptedLoadableModule.ScriptedLoadableModuleWidget method) openAddColorTableDialog() (in module slicer.util) openAddDataDialog() (in module slicer.util) openAddFiberBundleDialog() (in module slicer.util)

openAddFiducialDialog() (in module slicer.util) openAddMarkupsDialog() (in module slicer.util) openAddModelDialog() (in module slicer.util) openAddScalarOverlayDialog() (in module slicer.util) openAddSegmentationDialog() (in module slicer.util) openAddShaderPropertyDialog() (in module slicer.util) openAddTransformDialog() (in module slicer.util) openAddVolumeDialog() (in module slicer.util) openSaveDataDialog() (in module slicer.util)

P

pip_install() (in module slicer.packaging) pip_uninstall() (in module slicer.packaging)

plot() (in module slicer.util) pythonShell() (in module slicer.util)

Q

quit() (in module slicer.util)

R

real_module() (in module slicer.packaging) register() (slicer.packaging.Requirements method) register_constraints() (in module slicer.packaging) rejection (slicer.packaging.Requirements attribute) reloadScriptedModule() (in module slicer.util) removeObserver() (slicer.util.VTKObservationMixin method) removeObservers() (slicer.util.VTKObservationMixin method) removeParameterEditWidgetConnections() (in module slicer.util) RenderBlocker (class in slicer.util) Requirements (class in slicer.packaging) requirements (slicer.packaging.Requirements attribute) reset() (slicer.packaging.Requirements method)

reset_rejection() (slicer.packaging.Requirements method) resetSliceViews() (in module slicer.util) resetThreeDViews() (in module slicer.util) resolve() (slicer.packaging.Requirements method) ResourceName (in module slicer.packaging) resourcePath() (slicer.ScriptedLoadableModule.ScriptedLoadableModule method) (slicer.ScriptedLoadableModule.ScriptedLoadableModuleWidget method) restart() (in module slicer.util) run() (in module slicer.cli) runSync() (in module slicer.cli) runTest() (slicer.ScriptedLoadableModule.ScriptedLoadableModule method) (slicer.ScriptedLoadableModule.ScriptedLoadableModuleTest method) runUnitTest() (in module slicer.testing)

S

saveNode() (in module slicer.util) saveScene() (in module slicer.util) ScriptedLoadableModule (class in slicer.ScriptedLoadableModule) ScriptedLoadableModuleLogic (class in slicer.ScriptedLoadableModule) ScriptedLoadableModuleTest (class in slicer.ScriptedLoadableModule) ScriptedLoadableModuleWidget (class in slicer.ScriptedLoadableModule) selectedModule() (in module slicer.util) selectModule() (in module slicer.util) setApplicationLogoVisible() (in module slicer.util) setDataProbeVisible() (in module slicer.util) setErrorLogVisible() (in module slicer.util) setMenuBarsVisible() (in module slicer.util) setModuleHelpSectionVisible() (in module slicer.util) setModulePanelTitleVisible() (in module slicer.util) setNodeParameters() (in module slicer.cli) setPythonConsoleVisible() (in module slicer.util) setSliceViewerLayers() (in module slicer.util) setStatusBarVisible() (in module slicer.util) settingsValue() (in module slicer.util) setToolbarsVisible() (in module slicer.util)

setUp() (slicer.ScriptedLoadableModule.ScriptedLoadableModuleTest method) setup() (slicer.ScriptedLoadableModule.ScriptedLoadableModuleWidget method) setupDeveloperSection() (slicer.ScriptedLoadableModule.ScriptedLoadableModuleWidget method) setViewControllersVisible() (in module slicer.util) showStatusMessage() (in module slicer.util) slicer module slicer.cli module slicer.packaging module slicer.ScriptedLoadableModule module slicer.testing module slicer.util module sourceDir() (in module slicer.util) startQtDesigner() (in module slicer.util) startupEnvironment() (in module slicer.util)

T

takeScreenshot() (slicer.ScriptedLoadableModule.ScriptedLoadableModuleTest method) tearDown() (slicer.ScriptedLoadableModule.ScriptedLoadableModuleTest method) tempDirectory() (in module slicer.util) TESTING_DATA_URL (in module slicer.util)

toBool() (in module slicer.util) toLatin1String() (in module slicer.util) toVTKString() (in module slicer.util) tryWithErrorDisplay() (in module slicer.util)

U

updateMarkupsControlPointsFromArray() (in module slicer.util) updateNodeFromParameterEditWidgets() (in module slicer.util) updateParameterEditWidgetsFromNode() (in module slicer.util) updateSegmentBinaryLabelmapFromArray() (in module slicer.util)

updateTableFromArray() (in module slicer.util) updateTransformMatrixFromArray() (in module slicer.util) updateVolumeFromArray() (in module slicer.util) updateVolumeFromITKImage() (in module slicer.util) updateVTKMatrixFromArray() (in module slicer.util)

V

vtkMatrixFromArray() (in module slicer.util)

VTKObservationMixin (class in slicer.util)

W

WaitCursor (class in slicer.util)

warningDisplay() (in module slicer.util)